Teaching Undergraduate Biology Quantitatively Using Scientific Visualization and Graphic Display

1/25/2000


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Teaching Undergraduate Biology Quantitatively Using Scientific Visualization and Graphic Display

Funding and Support From:

Abstract #1164 MBC 10 Supplement: 201a (1999)

What I Do...

Purpose of the Approach

Outline

Basic Exercises: blood

Human Neutrophil: oil immersion

The Visualized Problem

Measuring the Diameter

Measuring the Area

Variation in Neutrophil Morphology

Extensions

Basic Example: simple tissue measurement

Cross-section of the Gas Exchange Barrier: density histogram

Applied Structure Function Relationships: ìthe facts, just the physiological factsî

More Facts, Maíam...

The Reality of Arterial Blood Flow in the Kidney: vascular cast

Providing Visual Context for Physiological Facts: interlobular artery

Providing Visual Context for Physiological Facts: afferent arteriole

Providing Visual Context for Physiological Facts: efferent arteriole

Blood Flow Visualized

The First Quantitative Question

The Solution

The Second Quantitative Question

Towards An Answer

Comment on the Approximation

More Comment

Pedagogical Comment and Extension

Image Processing Towards an Answer

Cross-sectional Data in Quick Order

Some Basic Geometry

Remember

And With Every Purchase There Is More

Remember 125 ml of Glomerular Filtrate?

Image Processing and Calculations

Choosing a Sample: human blood

A New Problem

First Pass at the Image Data Set

Towards Selecting a Sample

The IDEAL Red Blood Cell from a Smear

Starfish Embryos and Cleavage

4 - Cell Embryos: 20 grabs

Image Data Now Numbers

Choosing the Most Representative Embryos

Modeling Surface Area and Volume Changes

Question??

Charting Exercise

Example

The Tabular Data

Expressing the Data in Words

How Would You Graphically Display the Data?

Interpretation of the Original Data

Digital Motion Chart

Start Small and Stay Focused

Software

References

Author: Robert Blystone

Email: rblyston@trinity.edu

Home Page: www.trinity.edu/rblyston

Other information:
ASCB Presentation (12-13-99)

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